Transcript: lnc-HMGB2-13:2

Basic information

LNCipedia transcript ID: lnc-HMGB2-13:2 
LNCipedia gene ID: lnc-HMGB2-13
Location (hg38): chr4:172629935-172664262
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 595 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT099209
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.1214 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMGB2-13:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMGB2-13:2
4.0 lnc-HMGB2-13:2
4.1 lnc-HMGB2-13:2
5.0 lnc-HMGB2-13:2
5.1 lnc-HPGD-37:4
5.2 lnc-HMGB2-13:2