Transcript: lnc-HMGN1-1:12

Basic information

LNCipedia transcript ID: lnc-HMGN1-1:12 
LNCipedia gene ID: lnc-HMGN1-1
Location (hg38): chr21:39342352-39342896
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 545 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT082169
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.6889 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMGN1-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMGN1-1:12
4.0 lnc-HMGN1-1:12
4.1 lnc-HMGN1-1:12
5.0 lnc-HMGN1-1:12
5.1 lnc-CRYZL1-78:12
5.2 lnc-HMGN1-1:12