Transcript: lnc-HMGN1-1:7

Basic information

LNCipedia transcript ID: lnc-HMGN1-1:7 
LNCipedia gene ID: lnc-HMGN1-1
Location (hg38): chr21:39347995-39349020
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 701 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT082179
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 58.2403 non-coding 
CPAT coding probability 0.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HMGN1-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMGN1-1:7
4.0 lnc-HMGN1-1:7
4.1 lnc-HMGN1-1:7
5.0 lnc-HMGN1-1:7
5.1 lnc-CRYZL1-78:7
5.2 lnc-HMGN1-1:7