Transcript: lnc-HMX1-1:3

Basic information

LNCipedia transcript ID: lnc-HMX1-1:3 
LNCipedia gene ID: lnc-HMX1-1
Location (hg38): chr4:8745439-8747668
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 833 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT095113
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.1579 non-coding 
CPAT coding probability 85.16% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HMX1-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMX1-1:3
4.0 lnc-HMX1-1:3
4.1 lnc-HMX1-1:3
5.0 lnc-HMX1-1:3
5.1 lnc-AFAP1-12:1
5.2 lnc-HMX1-1:3