Transcript: lnc-HMX1-5:6

Basic information

LNCipedia transcript ID: lnc-HMX1-5:6 
LNCipedia gene ID: lnc-HMX1-5
Location (hg38): chr4:9051842-9052051
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 210 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT095125
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.887 non-coding 
CPAT coding probability 25.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMX1-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HMX1-3:1
4.0 lnc-HMX1-3:1
4.1 lnc-HMX1-4:7
5.0 lnc-HMX1-4:7
5.1 lnc-AFAP1-16:6
5.2 lnc-HMX1-5:6