Transcript: lnc-HMX1-6:1

Basic information

LNCipedia transcript ID: lnc-HMX1-6:1 
LNCipedia gene ID: lnc-HMX1-6
Location (hg38): chr4:9375083-9386359
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 234 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008431; NONHSAT095129
Alternative gene names: XLOC_003878; linc-HMX1-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 15.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HMX1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-1396O13.13.1-1:1
3.1 lnc-RP11-1396O13.13.1-1:1
4.0 lnc-RP11-1396O13.13.1-1:1
4.1 lnc-RP11-1396O13.13.1-1:1
5.0 lnc-RP11-1396O13.13.1-1:1
5.1 lnc-AFAP1-17:1
5.2 lnc-HMX1-6:1