Transcript: lnc-HNRNPA2B1-14:3

Basic information

LNCipedia transcript ID: lnc-HNRNPA2B1-14:3 
LNCipedia gene ID: lnc-HNRNPA2B1-14
Ensembl Gene ID: ENSG00000273237
Ensembl Transcript ID: ENST00000608362
Location (hg38): chr7:26173533-26174945
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1413 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608362.1
Alternative gene names: ENSG00000273237.1; CTB-119C2.1; AC004520.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.9282 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA2B1-14:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNRNPA2B1-7:2
4.0 lnc-HNRNPA2B1-7:2
4.1 lnc-HNRNPA2B1-7:2
5.0 lnc-HNRNPA2B1-7:2
5.1 lnc-SKAP2-14:3
5.2 lnc-HNRNPA2B1-14:3