Transcript: lnc-HNRNPA2B1-2:4

Basic information

LNCipedia transcript ID: lnc-HNRNPA2B1-2:4 
LNCipedia gene ID: lnc-HNRNPA2B1-2
Location (hg38): chr7:26069506-26072696
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 306 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013740; NONHSAT119615
Alternative gene names: XLOC_006385; linc-NPVF-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.826 non-coding 
CPAT coding probability 2.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPA2B1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HNRNPA2B1-2:4
3.1 lnc-HNRNPA2B1-2:4
4.0 lnc-HNRNPA2B1-2:4
4.1 lnc-HNRNPA2B1-2:4
5.0 lnc-HNRNPA2B1-2:4
5.1 lnc-SKAP2-17:7
5.2 lnc-HNRNPA2B1-2:4