Transcript: lnc-HNRNPU-1:2

Basic information

LNCipedia transcript ID: lnc-HNRNPU-1:2 
LNCipedia gene ID: lnc-HNRNPU-1
Location (hg38): chr1:244845252-244854503
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 451 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000489705.1; HNRNPU-AS1-003; OTTHUMT00000097406.1; NONHSAT010660
Alternative gene names: ENSG00000188206.5; HNRNPU-AS1; OTTHUMG00000040397.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.3899 non-coding 
CPAT coding probability 8.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HNRNPU-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HNRNPU-1:2
4.0 lnc-HNRNPU-1:2
4.1 lnc-HNRNPU-1:2
5.0 lnc-HNRNPU-1:2
5.1 lnc-CHML-43:5
5.2 lnc-HNRNPU-1:2

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