Transcript: lnc-HNRNPU-5:3

Basic information

LNCipedia transcript ID: lnc-HNRNPU-5:3 
LNCipedia gene ID: lnc-HNRNPU-5
Ensembl Gene ID: ENSG00000272195
Ensembl Transcript ID: ENST00000607453
Location (hg38): chr1:244969350-244971088
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1739 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607453.1
Alternative gene names: ENSG00000272195.1; RP11-156E8.1; AL356512.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -5.5264 non-coding 
CPAT coding probability 99.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HNRNPU-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HNRNPU-5:3
4.1 lnc-HNRNPU-5:3
5.0 lnc-HNRNPU-5:3
5.1 lnc-CHML-44:2
5.2 lnc-HNRNPU-5:3