Transcript: lnc-HPF1-2:3

Basic information

LNCipedia transcript ID: lnc-HPF1-2:3 
LNCipedia gene ID: lnc-HPF1-2
Location (hg38): chr4:169791220-169791702
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 483 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT099164
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9011 non-coding 
CPAT coding probability 85.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HPF1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C4orf27-2:2
4.0 lnc-C4orf27-2:2
4.1 lnc-C4orf27-2:2
5.0 lnc-C4orf27-2:2
5.1 lnc-HPF1-2:1
5.2 lnc-HPF1-2:3