Transcript: lnc-HPS3-3:4

Basic information

LNCipedia transcript ID: lnc-HPS3-3:4 
LNCipedia gene ID: lnc-HPS3-3
Location (hg38): chr3:149284784-149287862
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 610 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA977:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 41.9865 non-coding 
CPAT coding probability 18.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-HPS3-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-HPS3-3:4
4.1 lnc-HPS3-3:4
5.0 lnc-HPS3-3:4
5.1 lnc-HPS3-3:4
5.2 lnc-HPS3-3:4