Transcript: lnc-HS3ST3B1-1:4

Basic information

LNCipedia transcript ID: lnc-HS3ST3B1-1:4 
LNCipedia gene ID: lnc-HS3ST3B1-1
Location (hg38): chr17:14374111-14421026
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 832 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230647.1|ENST00000436469.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 23.8773 non-coding 
CPAT coding probability 1.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HS3ST3B1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HS3ST3B1-1:4
5.0 lnc-HS3ST3B1-1:4
5.1 lnc-GLP2R-42:3
5.2 lnc-HS3ST3B1-1:4