Transcript: lnc-HS3ST3B1-8:2

Basic information

LNCipedia transcript ID: lnc-HS3ST3B1-8:2 
LNCipedia gene ID: lnc-HS3ST3B1-8
Location (hg38): chr17:14441458-14441654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 655 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_12376_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.8089 non-coding 
CPAT coding probability 0.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HS3ST3B1-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HS3ST3B1-8:2
4.0 lnc-HS3ST3B1-8:2
4.1 lnc-HS3ST3B1-8:2
5.0 lnc-HS3ST3B1-8:2
5.1 lnc-GLP2R-44:2
5.2 lnc-HS3ST3B1-8:2