Transcript: lnc-HSF2-4:3

Basic information

LNCipedia transcript ID: lnc-HSF2-4:3 
LNCipedia gene ID: lnc-HSF2-4
Location (hg38): chr6:121917353-121962421
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1396 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00011943; NONHSAT114750
Alternative gene names: XLOC_005452; linc-HSF2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.0279 non-coding 
CPAT coding probability 4.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSF2-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GJA1-3:2
3.1 lnc-GJA1-3:3
4.0 lnc-HSF2-4:3
4.1 lnc-HSF2-4:3
5.0 lnc-HSF2-4:3
5.1 lnc-TPD52L1-25:3
5.2 lnc-HSF2-4:3