Transcript: lnc-HSF2-4:4

Basic information

LNCipedia transcript ID: lnc-HSF2-4:4 
LNCipedia gene ID: lnc-HSF2-4
Location (hg38): chr6:121917353-121961412
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 422 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012593; NONHSAT114749
Alternative gene names: XLOC_005452; linc-HSF2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.4047 non-coding 
CPAT coding probability 14.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSF2-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GJA1-3:3
3.1 lnc-GJA1-3:2
4.0 lnc-HSF2-4:4
4.1 lnc-HSF2-4:4
5.0 lnc-HSF2-4:4
5.1 lnc-TPD52L1-25:4
5.2 lnc-HSF2-4:4