Transcript: lnc-HSP90AA1-17:3

Basic information

LNCipedia transcript ID: lnc-HSP90AA1-17:3 
LNCipedia gene ID: lnc-HSP90AA1-17
Location (hg38): chr14:101761083-101761456
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 374 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000022097.1|ENCT00000137498.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -62.8981 non-coding 
CPAT coding probability 7.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSP90AA1-17:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSP90AA1-17:3
5.0 lnc-HSP90AA1-17:3
5.1 lnc-HSP90AA1-17:3
5.2 lnc-HSP90AA1-17:3