Transcript: lnc-HSPA12A-1:2

Basic information

LNCipedia transcript ID: lnc-HSPA12A-1:2 
LNCipedia gene ID: lnc-HSPA12A-1
Location (hg38): chr10:116820415-116850236
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 12334 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225302.1|MICT00000049173.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 20.0573 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA12A-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA1598-1:6
5.0 lnc-KIAA1598-1:6
5.1 lnc-NSMCE4A-89:1
5.2 lnc-HSPA12A-1:2