Transcript: lnc-HSPA14-3:1

Basic information

LNCipedia transcript ID: lnc-HSPA14-3:1 
LNCipedia gene ID: lnc-HSPA14-3
Location (hg38): chr10:14604543-14607012
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2470 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000106742.1|ENCT00000043812.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.3807 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA14-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSPA14-3:1
5.0 lnc-HSPA14-3:1
5.1 lnc-NPY4R2-355:1
5.2 lnc-HSPA14-3:1