Transcript: lnc-HSPA4-7:2

Basic information

LNCipedia transcript ID: lnc-HSPA4-7:2 
LNCipedia gene ID: lnc-HSPA4-7
Location (hg38): chr5:132963825-132964164
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 340 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272023.1|ENST00000607688.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA4-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-HSPA4-7:2
5.0 lnc-HSPA4-7:2
5.1 lnc-PDLIM4-24:2
5.2 lnc-HSPA4-7:2