Transcript: lnc-HSPA5-3:2

Basic information

LNCipedia transcript ID: lnc-HSPA5-3:2 
LNCipedia gene ID: lnc-HSPA5-3
Location (hg38): chr9:125438469-125471905
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1603 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT134740
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.8864 non-coding 
CPAT coding probability 18.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HSPA5-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HSPA5-3:2
4.0 lnc-HSPA5-3:2
4.1 lnc-HSPA5-3:2
5.0 lnc-HSPA5-3:2
5.1 lnc-ZBTB6-52:2
5.2 lnc-HSPA5-3:2