Transcript: lnc-HUWE1-3:1

Basic information

LNCipedia transcript ID: lnc-HUWE1-3:1 
LNCipedia gene ID: lnc-HUWE1-3
Location (hg38): chrX:53700515-53701036
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 522 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chrX_3380_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.2286 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HUWE1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HUWE1-3:1
4.0 lnc-HUWE1-3:1
4.1 lnc-HUWE1-3:1
5.0 lnc-HUWE1-3:1
5.1 lnc-FAM120C-5:1
5.2 lnc-HUWE1-3:1