Transcript: lnc-HYOU1-1:3

Basic information

LNCipedia transcript ID: lnc-HYOU1-1:3 
LNCipedia gene ID: lnc-HYOU1-1
Ensembl Gene ID: ENSG00000272186
Ensembl Transcript ID: ENST00000607709
Location (hg38): chr11:119067374-119067698
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 325 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607709.1
Alternative gene names: ENSG00000272186.1; RP11-110I1.13; AP003392.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -172.5414 non-coding 
CPAT coding probability 10.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HYOU1-1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HYOU1-1:3
4.0 lnc-HYOU1-1:3
4.1 lnc-HYOU1-1:3
5.0 lnc-HYOU1-1:3
5.1 lnc-SLC37A4-7:3
5.2 lnc-HYOU1-1:3