Transcript: lnc-HYPM-1:1

Basic information

LNCipedia transcript ID: lnc-HYPM-1:1 
LNCipedia gene ID: lnc-HYPM-1
Ensembl Gene ID: ENSG00000259977
Ensembl Transcript ID: ENST00000567273
Location (hg38): chrX:37906147-37949405
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 710 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567273.1; AL121578.2-001; OTTHUMT00000080886.1; NONHSAT136635
Alternative gene names: ENSG00000259977.1; AL121578.2; OTTHUMG00000033178.1; AL121578.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -109.8199 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HYPM-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf27-1:1
4.0 lnc-CXorf27-1:1
4.1 lnc-CXorf27-1:1
5.0 lnc-CXorf27-1:1
5.1 lnc-GK-73:1
5.2 lnc-HYPM-1:1