Transcript: lnc-ICOSLG-1:5

Basic information

LNCipedia transcript ID: lnc-ICOSLG-1:5 
LNCipedia gene ID: lnc-ICOSLG-1
Location (hg38): chr21:44199249-44201333
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1975 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029175; NONHSAT082492
Alternative gene names: XLOC_014114; linc-CSTB-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.662 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ICOSLG-2:1
3.1 lnc-ICOSLG-2:1
4.0 lnc-ICOSLG-1:5
4.1 lnc-ICOSLG-1:5
5.0 lnc-ICOSLG-1:5
5.1 lnc-POFUT2-28:7
5.2 lnc-ICOSLG-1:5