Transcript: lnc-ICOSLG-6:12

Basic information

LNCipedia transcript ID: lnc-ICOSLG-6:12 
LNCipedia gene ID: lnc-ICOSLG-6
Location (hg38): chr21:44167115-44175263
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5006 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225331.1|MICT00000227537.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 16.1738 non-coding 
CPAT coding probability 7.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-6:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ICOSLG-6:12
5.0 lnc-ICOSLG-6:12
5.1 lnc-POFUT2-29:5
5.2 lnc-ICOSLG-6:12