Transcript: lnc-ICOSLG-6:22

Basic information

LNCipedia transcript ID: lnc-ICOSLG-6:22 
LNCipedia gene ID: lnc-ICOSLG-6
Location (hg38): chr21:44190439-44194304
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 399 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029174; NONHSAT082491
Alternative gene names: XLOC_014113; linc-CSTB-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-6:22 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ICOSLG-3:1
3.1 lnc-ICOSLG-3:1
4.0 lnc-ICOSLG-3:1
4.1 lnc-ICOSLG-3:1
5.0 lnc-ICOSLG-3:1
5.1 lnc-POFUT2-29:2
5.2 lnc-ICOSLG-6:22