Transcript: lnc-ICOSLG-6:7

Basic information

LNCipedia transcript ID: lnc-ICOSLG-6:7 
LNCipedia gene ID: lnc-ICOSLG-6
Location (hg38): chr21:44174049-44188497
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 346 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029173; NONHSAT082489
Alternative gene names: XLOC_014112; linc-CSTB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.7561 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ICOSLG-6:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ICOSLG-4:1
3.1 lnc-ICOSLG-4:1
4.0 lnc-ICOSLG-4:1
4.1 lnc-ICOSLG-6:7
5.0 lnc-ICOSLG-6:7
5.1 lnc-POFUT2-29:3
5.2 lnc-ICOSLG-6:7