Transcript: lnc-ID4-42:1

Basic information

LNCipedia transcript ID: lnc-ID4-42:1 
LNCipedia gene ID: lnc-ID4-42
RefSeq ID: NR_134615
Location (hg38): chr6:19449821-19459348
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_134615.1
Alternative gene names: LOC105374960


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -222.4605 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ID4-42:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-GMNN-42:1
5.1 lnc-GMNN-42:1
5.2 lnc-ID4-42:1