Transcript: lnc-IDH3B-2:3

Basic information

LNCipedia transcript ID: lnc-IDH3B-2:3 
LNCipedia gene ID: lnc-IDH3B-2
Location (hg38): chr20:2650115-2652464
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2350 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000054079.1|FTMT27800000168.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -115.7587 non-coding 
CPAT coding probability 4.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IDH3B-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IDH3B-2:3
5.0 lnc-IDH3B-2:3
5.1 lnc-RNF24-40:2
5.2 lnc-IDH3B-2:3