Transcript: lnc-IDI1-1:1

Basic information

LNCipedia transcript ID: lnc-IDI1-1:1 
LNCipedia gene ID: lnc-IDI1-1
Ensembl Gene ID: ENSG00000233052
Ensembl Transcript ID: ENST00000432987
Location (hg38): chr10:1361001-1361637
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 359 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000432987.1; RP11-398B16.2-001; OTTHUMT00000046423.1; NONHSAT010931
Alternative gene names: ENSG00000233052.1; RP11-398B16.2; OTTHUMG00000017541.1; AL513304.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -102.2507 non-coding 
CPAT coding probability 1.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IDI1-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IDI1-1:1
4.0 lnc-IDI1-1:1
4.1 lnc-IDI1-1:1
5.0 lnc-IDI1-1:1
5.1 lnc-KLF6-76:1
5.2 lnc-IDI1-1:1