Transcript: lnc-IDNK-1:1

Basic information

LNCipedia transcript ID: lnc-IDNK-1:1 
LNCipedia gene ID: lnc-IDNK-1
RefSeq ID: NR_135839
Location (hg38): chr9:83707835-83713496
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1477 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135839.1
Alternative gene names: LOC105376114


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.7235 non-coding 
CPAT coding probability 80.53% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IDNK-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SECISBP2-81:2
5.1 lnc-SECISBP2-81:2
5.2 lnc-IDNK-1:1