Transcript: lnc-IDNK-3:8

Basic information

LNCipedia transcript ID: lnc-IDNK-3:8 
LNCipedia gene ID: lnc-IDNK-3
Location (hg38): chr9:83253263-83284397
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2007 bp
Exons: 9
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc004ant_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 47.0729 non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IDNK-3:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf103-5:1
4.0 lnc-C9orf103-5:1
4.1 lnc-C9orf103-3:8
5.0 lnc-C9orf103-3:8
5.1 lnc-SECISBP2-82:8
5.2 lnc-IDNK-3:8