Transcript: lnc-IFFO1-1:4

Basic information

LNCipedia transcript ID: lnc-IFFO1-1:4 
LNCipedia gene ID: lnc-IFFO1-1
Location (hg38): chr12:6531618-6533499
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1570 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255966.1|ENCT00000098384.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -48.5565 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IFFO1-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IFFO1-1:4
5.0 lnc-IFFO1-1:4
5.1 lnc-CHD4-7:3
5.2 lnc-IFFO1-1:4