Transcript: lnc-IGFBP2-8:1

Basic information

LNCipedia transcript ID: lnc-IGFBP2-8:1 
LNCipedia gene ID: lnc-IGFBP2-8
Ensembl Gene ID: ENSG00000236886
Ensembl Transcript ID: ENST00000607591
Location (hg38): chr2:216862200-216994079
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 394 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000607591.1
Alternative gene names: ENSG00000236886.2; AC007563.5; AC007563.2

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.6316 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP2-8:1 no no no no

Available literature

  1. Dryden (2014), Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C., Genome Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007557.1.1-3:4
4.0 lnc-AC007557.1.1-3:4
4.1 lnc-AC007557.1.1-3:4
5.0 lnc-AC007557.1.1-3:4
5.1 lnc-TMEM169-34:5
5.2 lnc-IGFBP2-8:1