Transcript: lnc-IGFBP2-8:2

Basic information

LNCipedia transcript ID: lnc-IGFBP2-8:2 
LNCipedia gene ID: lnc-IGFBP2-8
Location (hg38): chr2:216987969-216996564
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 767 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT076845; FPKM1_group_18294_transcript_1
Alternative gene names:

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.1486 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP2-8:2 no no no no

Available literature

  1. Dryden (2014), Unbiased analysis of potential targets of breast cancer susceptibility loci by Capture Hi-C., Genome Res.

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007557.1.1-3:5
4.0 lnc-AC007557.1.1-3:5
4.1 lnc-AC007557.1.1-3:5
5.0 lnc-AC007557.1.1-3:5
5.1 lnc-TMEM169-34:6
5.2 lnc-IGFBP2-8:2