Transcript: lnc-IGFBP7-5:14

Basic information

LNCipedia transcript ID: lnc-IGFBP7-5:14 
LNCipedia gene ID: lnc-IGFBP7-5
RefSeq ID: NR_133940
Location (hg38): chr4:58987187-58988154
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 623 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_133940.1
Alternative gene names: LOC105377245


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.2559 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP7-5:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-CENPC-68:4
5.1 lnc-CENPC-68:4
5.2 lnc-IGFBP7-5:14