Transcript: lnc-IGFBP7-5:2

Basic information

LNCipedia transcript ID: lnc-IGFBP7-5:2 
LNCipedia gene ID: lnc-IGFBP7-5
Location (hg38): chr4:58860885-58988155
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 277 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009063; NONHSAT096580
Alternative gene names: XLOC_003962; linc-IGFBP7-7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.1423 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFBP7-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGFBP7-4:2
3.1 lnc-IGFBP7-5:2
4.0 lnc-IGFBP7-5:2
4.1 lnc-IGFBP7-5:2
5.0 lnc-IGFBP7-5:2
5.1 lnc-CENPC-68:2
5.2 lnc-IGFBP7-5:2