Transcript: lnc-IGFL1-1:12

Basic information

LNCipedia transcript ID: lnc-IGFL1-1:12 
LNCipedia gene ID: lnc-IGFL1-1
Ensembl Gene ID: ENSG00000268460
Ensembl Transcript ID: ENST00000598170
Location (hg38): chr19:46210242-46214837
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1634 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NR_027003; ENST00000598170.1
Alternative gene names: ENSG00000268460.1; AC006262.6; DKFZp434J0226; AC006262.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.539 non-coding 
CPAT coding probability 46.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IGFL1-1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGFL1-1:12
4.0 lnc-IGFL1-1:12
4.1 lnc-IGFL1-1:12
5.0 lnc-IGFL1-1:12
5.1 lnc-BHMG1-12:11
5.2 lnc-IGFL1-1:12