Transcript: lnc-IGFL1-1:6

Basic information

LNCipedia transcript ID: lnc-IGFL1-1:6 
LNCipedia gene ID: lnc-IGFL1-1
Location (hg38): chr19:46210242-46214835
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1632 bp
Exons: 6
Sources: Broad Institute
Alternative transcript names: TCONS_00026754
Alternative gene names: XLOC_013100; linc-IGFL1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.539 non-coding 
CPAT coding probability 46.28% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IGFL1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGFL1-1:6
3.1 lnc-IGFL1-1:6
4.0 lnc-IGFL1-1:6
4.1 lnc-IGFL1-1:6
5.0 lnc-IGFL1-1:6
5.1 lnc-BHMG1-12:9
5.2 lnc-IGFL1-1:6