Transcript: lnc-IGFL1-1:8

Basic information

LNCipedia transcript ID: lnc-IGFL1-1:8 
LNCipedia gene ID: lnc-IGFL1-1
Ensembl Gene ID: ENSG00000268460
Ensembl Transcript ID: ENST00000596066
Location (hg38): chr19:46206743-46210088
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3346 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066865; ENST00000596066.1
Alternative gene names: ENSG00000268460.1; AC006262.6; DKFZp434J0226; AC006262.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.956 non-coding 
CPAT coding probability 53.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-IGFL1-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGFL1-1:8
4.0 lnc-IGFL1-1:8
4.1 lnc-IGFL1-1:8
5.0 lnc-IGFL1-1:8
5.1 lnc-BHMG1-12:3
5.2 lnc-IGFL1-1:8