Transcript: lnc-IGFL3-1:6

Basic information

LNCipedia transcript ID: lnc-IGFL3-1:6 
LNCipedia gene ID: lnc-IGFL3-1
Location (hg38): chr19:46163893-46180863
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 828 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269729.1|ENST00000599127.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.1241 non-coding 
CPAT coding probability 2.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFL3-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IGFL3-1:6
5.0 lnc-IGFL3-1:6
5.1 lnc-RSPH6A-7:3
5.2 lnc-IGFL3-1:6