Transcript: lnc-IGFL3-5:1

Basic information

LNCipedia transcript ID: lnc-IGFL3-5:1 
LNCipedia gene ID: lnc-IGFL3-5
Ensembl Gene ID: ENSG00000269745
Ensembl Transcript ID: ENST00000597337
Location (hg38): chr19:46228964-46230388
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 258 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066874; ENST00000597337.1
Alternative gene names: ENSG00000269745.1; AC006262.10; AC006262.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -43.429 non-coding 
CPAT coding probability 0.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGFL3-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGFL3-5:1
4.0 lnc-IGFL3-5:1
4.1 lnc-IGFL3-5:1
5.0 lnc-IGFL3-5:1
5.1 lnc-RSPH6A-9:1
5.2 lnc-IGFL3-5:1