Transcript: lnc-IGLL1-1:40

Basic information

LNCipedia transcript ID: lnc-IGLL1-1:40 
LNCipedia gene ID: lnc-IGLL1-1
Location (hg38): chr22:23659876-23690491
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 543 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT083952
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.638 non-coding 
CPAT coding probability 4.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGLL1-1:40 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf43-1:31
4.0 lnc-C22orf43-1:31
4.1 lnc-IGLL1-1:40
5.0 lnc-IGLL1-1:40
5.1 lnc-SCARF2-65:39
5.2 lnc-IGLL1-1:40