Transcript: lnc-IGLL1-1:61

Basic information

LNCipedia transcript ID: lnc-IGLL1-1:61 
LNCipedia gene ID: lnc-IGLL1-1
Ensembl Gene ID: ENSG00000272733
Ensembl Transcript ID: ENST00000608615
Location (hg38): chr22:23580880-23583859
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1081 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608615.1
Alternative gene names: ENSG00000272733.1; KB-208E9.1; AP000345.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.4859 non-coding 
CPAT coding probability 13.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGLL1-1:61 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IGLL1-3:2
4.0 lnc-IGLL1-3:2
4.1 lnc-IGLL1-1:61
5.0 lnc-IGLL1-1:61
5.1 lnc-SCARF2-65:60
5.2 lnc-IGLL1-1:61