Transcript: lnc-IKZF2-3:7

Basic information

LNCipedia transcript ID: lnc-IKZF2-3:7 
LNCipedia gene ID: lnc-IKZF2-3
Location (hg38): chr2:213276009-213284216
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 415 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000196096.3|FTMT20500082322.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -166.028 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IKZF2-3:7 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-IKZF2-3:7
5.0 lnc-IKZF2-3:7
5.1 lnc-FN1-3:11
5.2 lnc-IKZF2-3:7