Transcript: lnc-IL16-12:1

Basic information

LNCipedia transcript ID: lnc-IL16-12:1 
LNCipedia gene ID: lnc-IL16-12
Location (hg38): chr15:81398920-81409915
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10658 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT047738; FPKM1_group_10626_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.2605 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL16-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL16-2:2
4.0 lnc-IL16-2:2
4.1 TMC3-AS1:14
5.0 TMC3-AS1:14
5.1 lnc-CFAP161-28:1
5.2 lnc-IL16-12:1