Transcript: lnc-IL16-12:3

Basic information

LNCipedia transcript ID: lnc-IL16-12:3 
LNCipedia gene ID: lnc-IL16-12
Location (hg38): chr15:81407489-81409852
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 784 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023483; NONHSAT047739
Alternative gene names: XLOC_011329; linc-FAM154B-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.2605 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL16-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IL16-1:1
3.1 lnc-IL16-2:1
4.0 lnc-IL16-2:1
4.1 TMC3-AS1:16
5.0 TMC3-AS1:16
5.1 lnc-CFAP161-28:3
5.2 lnc-IL16-12:3