Transcript: lnc-IL16-13:2

Basic information

LNCipedia transcript ID: lnc-IL16-13:2 
LNCipedia gene ID: lnc-IL16-13
Location (hg38): chr15:81410605-81419127
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 290 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000559698.2
Alternative gene names: ENSG00000259372.2; CTD-2240J17.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.1367 non-coding 
CPAT coding probability 0.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL16-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-IL16-3:3
4.1 TMC3-AS1:19
5.0 TMC3-AS1:19
5.1 lnc-CFAP161-29:2
5.2 lnc-IL16-13:2