Transcript: lnc-IL17A-2:4

Basic information

LNCipedia transcript ID: lnc-IL17A-2:4 
LNCipedia gene ID: lnc-IL17A-2
Location (hg38): chr6:51621835-51622541
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 274 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT113094; ENST00000587000.1
Alternative gene names: ENSG00000228689.3; RP3-335N17.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -322.4557 non-coding 
CPAT coding probability 2.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IL17A-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IL17A-2:4
4.0 lnc-IL17A-2:4
4.1 lnc-IL17A-2:4
5.0 lnc-IL17A-2:4
5.1 lnc-EFHC1-13:5
5.2 lnc-IL17A-2:4